It appears that your build didn’t find libusb, so it has no usb support in either version. LimeUtil only shows the PCIEXillybus, not usb.
I have installed libusb via fink, and it almost works (works fine until anyone tries to stop running) but I ran into this issue which I posted on a couple weeks ago:
when I close a connection.
By building libusb from source, with the suspect line commented out as per that note, I am apparently at 100% with LimeMini.